Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gm270-201ENSMUST00000223010 976 ntBASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Aph1bQ8C7N7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.46□□□□□ -0.58
Aph1bQ8C7N7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm15207-201ENSMUST00000119259 442 ntBASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.45□□□□□ -0.58
Aph1bQ8C7N7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms