Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm5395-201ENSMUST00000121650 915 ntBASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm5335-201ENSMUST00000182995 1000 ntBASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm8756-201ENSMUST00000183250 929 ntBASIC15□□□□□ -0.01
Col16a1Q8BLX7 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Gm42432-201ENSMUST00000197902 1617 ntBASIC15□□□□□ -0.01
Col16a1Q8BLX7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col16a1Q8BLX7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm15707-201ENSMUST00000118804 996 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 AC164087.2-201ENSMUST00000216206 1072 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm10580-201ENSMUST00000097985 396 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm10582-201ENSMUST00000097987 396 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm10583-201ENSMUST00000097988 396 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.99□□□□□ -0.01
Col16a1Q8BLX7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Mir6953-201ENSMUST00000184745 68 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms