Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trnp1Q80ZI1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trnp1Q80ZI1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trnp1Q80ZI1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.05□□□□□ -0.32
Trnp1Q80ZI1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm7627-201ENSMUST00000183205 999 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm5178-201ENSMUST00000219380 898 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm25580-201ENSMUST00000083409 327 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trnp1Q80ZI1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm23769-201ENSMUST00000104441 121 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm26782-203ENSMUST00000227103 751 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trnp1Q80ZI1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trnp1Q80ZI1 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms