Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm23045-201ENSMUST00000175041 96 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm8365-201ENSMUST00000197334 648 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm43186-201ENSMUST00000198130 824 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm6867-201ENSMUST00000219165 425 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh8Q7TSK3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm26047-201ENSMUST00000157308 113 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm6485-201ENSMUST00000160676 439 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm27910-201ENSMUST00000185004 107 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm9540-201ENSMUST00000188230 478 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm9645-201ENSMUST00000197131 792 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm26047-202ENSMUST00000198840 115 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm6450-201ENSMUST00000200896 574 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms