Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Gm17826-201ENSMUST00000189720 798 ntBASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nphp3Q7TNH6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm12029-201ENSMUST00000120073 832 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm26047-201ENSMUST00000157308 113 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm26047-202ENSMUST00000198840 115 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm44551-201ENSMUST00000208804 171 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Gm18065-201ENSMUST00000221395 526 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Snora73b-201ENSMUST00000083419 205 ntBASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nphp3Q7TNH6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm25076-201ENSMUST00000104098 132 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm15374-201ENSMUST00000119313 844 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm37299-201ENSMUST00000193951 826 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm43520-201ENSMUST00000197996 164 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm8574-201ENSMUST00000203207 924 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm17825-201ENSMUST00000206836 794 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm8342-201ENSMUST00000209839 757 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nphp3Q7TNH6 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms