Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Gm12490-201ENSMUST00000120255 560 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.86□□□□□ -0.67
Sox17Q61473 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.85□□□□□ -0.67
Sox17Q61473 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox17Q61473 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox17Q61473 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox17Q61473 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm12390-201ENSMUST00000117897 397 ntBASIC10.85□□□□□ -0.67
Sox17Q61473 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sox17Q61473 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm6439-201ENSMUST00000199849 862 ntBASIC10.85□□□□□ -0.67
Sox17Q61473 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox17Q61473 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.85□□□□□ -0.67
Sox17Q61473 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Sox17Q61473 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox17Q61473 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox17Q61473 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox17Q61473 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms