Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SgcdP82347 Gm11964-201ENSMUST00000120982 444 ntBASIC10.83□□□□□ -0.68
SgcdP82347 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Gm7809-201ENSMUST00000153199 742 ntBASIC10.83□□□□□ -0.68
SgcdP82347 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.83□□□□□ -0.68
SgcdP82347 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Gm32025-201ENSMUST00000217960 307 ntBASIC10.83□□□□□ -0.68
SgcdP82347 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.83□□□□□ -0.68
SgcdP82347 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SgcdP82347 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SgcdP82347 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SgcdP82347 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SgcdP82347 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.83□□□□□ -0.68
SgcdP82347 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.83□□□□□ -0.68
SgcdP82347 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.82□□□□□ -0.68
SgcdP82347 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.82□□□□□ -0.68
SgcdP82347 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm11591-201ENSMUST00000120063 702 ntBASIC10.82□□□□□ -0.68
SgcdP82347 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.82□□□□□ -0.68
SgcdP82347 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.82□□□□□ -0.68
SgcdP82347 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm38158-201ENSMUST00000194617 339 ntBASIC10.82□□□□□ -0.68
SgcdP82347 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.82□□□□□ -0.68
SgcdP82347 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
SgcdP82347 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SgcdP82347 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SgcdP82347 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SgcdP82347 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcdP82347 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms