Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.52■□□□□ 0.08
RARAP10276 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.52■□□□□ 0.08
RARAP10276 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.52■□□□□ 0.08
RARAP10276 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 AC007389.4-201ENST00000454674 793 ntBASIC15.52■□□□□ 0.08
RARAP10276 INE1-201ENST00000456273 945 ntBASIC15.52■□□□□ 0.08
RARAP10276 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.52■□□□□ 0.08
RARAP10276 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 AL596325.1-201ENST00000563991 1082 ntBASIC15.52■□□□□ 0.08
RARAP10276 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 RN7SL48P-201ENST00000579283 293 ntBASIC15.52■□□□□ 0.08
RARAP10276 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.52■□□□□ 0.08
RARAP10276 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RARAP10276 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 AC138466.3-201ENST00000619983 221 ntBASIC15.52■□□□□ 0.08
RARAP10276 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RARAP10276 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RARAP10276 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RARAP10276 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.52■□□□□ 0.07
RARAP10276 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RARAP10276 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RARAP10276 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RARAP10276 AC011840.2-201ENST00000563063 1520 ntBASIC15.52■□□□□ 0.07
RARAP10276 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.52■□□□□ 0.07
RARAP10276 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RARAP10276 MYADML-201ENST00000474610 2147 ntBASIC15.52■□□□□ 0.07
RARAP10276 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.52■□□□□ 0.07
RARAP10276 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.52■□□□□ 0.07
RARAP10276 RN7SL832P-201ENST00000607781 1756 ntBASIC15.52■□□□□ 0.07
RARAP10276 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RARAP10276 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.52■□□□□ 0.07
RARAP10276 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 AL136172.1-201ENST00000598590 1394 ntBASIC15.51■□□□□ 0.07
RARAP10276 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 AC097376.2-205ENST00000610159 5334 ntBASIC15.51■□□□□ 0.07
RARAP10276 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RARAP10276 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.51■□□□□ 0.07
RARAP10276 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.51■□□□□ 0.07
RARAP10276 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 USP32P1-208ENST00000506594 1164 ntBASIC15.51■□□□□ 0.07
RARAP10276 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.51■□□□□ 0.07
RARAP10276 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 SLC25A47P1-201ENST00000531577 414 ntBASIC15.51■□□□□ 0.07
RARAP10276 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 AC132938.2-201ENST00000579188 680 ntBASIC15.51■□□□□ 0.07
RARAP10276 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 AC138696.2-201ENST00000607376 223 ntBASIC15.51■□□□□ 0.07
RARAP10276 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 AL591163.1-201ENST00000641757 987 ntBASIC15.51■□□□□ 0.07
RARAP10276 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 AC099521.3-201ENST00000624251 2938 ntBASIC15.51■□□□□ 0.07
RARAP10276 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 AC020910.6-201ENST00000623084 1459 ntBASIC15.51■□□□□ 0.07
RARAP10276 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms