Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 AC018735.1-201ENST00000437208 1502 ntBASIC14.94□□□□□ -0.02
TRIM38O00635 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM38O00635 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 CNN2P10-201ENST00000443067 918 ntBASIC14.94□□□□□ -0.02
TRIM38O00635 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM38O00635 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRIM38O00635 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM38O00635 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM38O00635 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRIM38O00635 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM38O00635 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM38O00635 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 LRRC59-203ENST00000576448 1531 ntBASIC14.93□□□□□ -0.02
TRIM38O00635 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRIM38O00635 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 RPL5P21-201ENST00000404620 815 ntBASIC14.93□□□□□ -0.02
TRIM38O00635 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 FNTAP2-201ENST00000430308 634 ntBASIC14.93□□□□□ -0.02
TRIM38O00635 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM38O00635 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRIM38O00635 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM38O00635 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM38O00635 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM38O00635 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM38O00635 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms