Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm11700-201ENSMUST00000119409 403 ntBASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm14247-201ENSMUST00000120950 237 ntBASIC11.71□□□□□ -0.53
Trim42Q9D2H5 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm27486-201ENSMUST00000184923 80 ntBASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm36943-201ENSMUST00000194422 282 ntBASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim42Q9D2H5 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim42Q9D2H5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm8652-201ENSMUST00000181363 964 ntBASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm18351-201ENSMUST00000188646 883 ntBASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim42Q9D2H5 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms