Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm13183-201ENSMUST00000118615 789 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm15573-201ENSMUST00000119487 540 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm10774-201ENSMUST00000188689 204 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Otud1Q9CUB6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.15□□□□□ -0.63
Otud1Q9CUB6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Otud1Q9CUB6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Otud1Q9CUB6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Otud1Q9CUB6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Otud1Q9CUB6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm13916-201ENSMUST00000117368 628 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm28937-201ENSMUST00000185413 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm29400-201ENSMUST00000187208 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm28662-201ENSMUST00000188446 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm28251-201ENSMUST00000188835 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm37857-201ENSMUST00000191784 1199 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm37318-201ENSMUST00000194325 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm38017-201ENSMUST00000194768 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm37287-201ENSMUST00000195449 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm37793-201ENSMUST00000195548 695 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm8190-201ENSMUST00000199603 586 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm45113-201ENSMUST00000207518 165 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 AC153932.1-201ENSMUST00000218558 787 ntBASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Otud1Q9CUB6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms