Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm22042-201ENSMUST00000082989 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm26110-201ENSMUST00000083971 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm43339-201ENSMUST00000200032 1606 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm43002-201ENSMUST00000200310 155 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm4157-201ENSMUST00000211647 679 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm6082-201ENSMUST00000215204 454 ntBASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H1fooQ8VIK3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm5616-201ENSMUST00000165252 384 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm8741-201ENSMUST00000174736 384 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm43184-201ENSMUST00000197247 542 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 AY036118-201ENSMUST00000200021 923 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
H1fooQ8VIK3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms