Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Gm14999-201ENSMUST00000121039 624 ntBASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh18Q8VHR0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm24830-201ENSMUST00000102024 166 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm13570-201ENSMUST00000140763 309 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm27514-201ENSMUST00000183692 110 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 AY702102-202ENSMUST00000194651 1173 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Gm26232-201ENSMUST00000083360 166 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh18Q8VHR0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Snora78-201ENSMUST00000158630 128 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms