Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gm44397-201ENSMUST00000195950 113 ntBASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gm18018-201ENSMUST00000198273 408 ntBASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gm6983-201ENSMUST00000214912 628 ntBASIC14□□□□□ -0.17
Ccdc9Q8VC31 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14□□□□□ -0.17
Ccdc9Q8VC31 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gm11978-201ENSMUST00000122315 466 ntBASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gm37307-201ENSMUST00000193663 2621 ntBASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc9Q8VC31 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm38169-201ENSMUST00000191822 2539 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm37608-201ENSMUST00000195696 1880 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Mir339-201ENSMUST00000083659 96 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm16478-201ENSMUST00000208113 5084 ntBASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms