Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm23251-201ENSMUST00000103773 110 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Gm12165-201ENSMUST00000117047 342 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm15432-201ENSMUST00000121106 195 ntBASIC9.6□□□□□ -0.87
Timp3P39876 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm23699-201ENSMUST00000158835 135 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm19353-201ENSMUST00000184561 445 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.6□□□□□ -0.87
Timp3P39876 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm1821-202ENSMUST00000227415 750 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Gm5705-201ENSMUST00000066241 711 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Gm10288-201ENSMUST00000084614 537 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Timp3P39876 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.6□□□□□ -0.87
Timp3P39876 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.6□□□□□ -0.87
Timp3P39876 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.59□□□□□ -0.87
Timp3P39876 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.59□□□□□ -0.87
Timp3P39876 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.59□□□□□ -0.87
Timp3P39876 Gm8566-201ENSMUST00000120174 465 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.59□□□□□ -0.87
Timp3P39876 Gm14247-201ENSMUST00000120950 237 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.59□□□□□ -0.87
Timp3P39876 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms