Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm9279-201ENSMUST00000223175 1606 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm12749-201ENSMUST00000122138 1159 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm24749-201ENSMUST00000157838 343 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm28071-201ENSMUST00000190355 478 ntBASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav9n-2A0A0G2JDP3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms