Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm44008-201ENSMUST00000204345 412 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Mir7686-201ENSMUST00000200604 57 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Upk3aQ9JKX8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm22144-201ENSMUST00000157402 102 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms