Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm6334-201ENSMUST00000207083 228 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm30285-201ENSMUST00000214614 422 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trim39Q9ESN2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm6621-201ENSMUST00000193251 772 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm9899-201ENSMUST00000065519 555 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim39Q9ESN2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.01□□□□□ -0.65
Trim39Q9ESN2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim39Q9ESN2 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms