Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cpne8Q9DC53 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm45186-201ENSMUST00000206874 478 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm270-201ENSMUST00000223010 976 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm807-202ENSMUST00000224929 408 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Gm26448-201ENSMUST00000082446 203 ntBASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne8Q9DC53 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Gm23596-201ENSMUST00000104304 132 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Gm26083-201ENSMUST00000157904 193 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne8Q9DC53 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms