Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm15196-201ENSMUST00000121406 482 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm25226-201ENSMUST00000158198 123 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm26272-201ENSMUST00000179241 132 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm26976-201ENSMUST00000182929 908 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm42660-201ENSMUST00000197733 947 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm43854-201ENSMUST00000200418 394 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm9487-201ENSMUST00000216600 472 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm23612-201ENSMUST00000103823 110 ntBASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm23576-201ENSMUST00000179918 110 ntBASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm8255-201ENSMUST00000218693 305 ntBASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cldnd1Q9CQX5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm6158-201ENSMUST00000109467 904 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm8111-201ENSMUST00000117659 987 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm13204-201ENSMUST00000120110 821 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm14165-201ENSMUST00000121456 952 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm23675-201ENSMUST00000157311 125 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms