Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Snora73a-201ENSMUST00000082453 205 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm14999-201ENSMUST00000121039 624 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm27572-201ENSMUST00000183702 255 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.75□□□□□ -0.53
Cdk9Q99J95 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk9Q99J95 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm7809-201ENSMUST00000153199 742 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm5706-201ENSMUST00000181525 993 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.74□□□□□ -0.53
Cdk9Q99J95 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk9Q99J95 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk9Q99J95 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms