Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr1Q8VHP6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr1Q8VHP6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.52□□□□□ -0.57
Cdhr1Q8VHP6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr1Q8VHP6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm14193-201ENSMUST00000105067 153 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm11949-201ENSMUST00000117640 372 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm43186-201ENSMUST00000198130 824 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr1Q8VHP6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gm23045-201ENSMUST00000175041 96 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Mir8115-201ENSMUST00000184992 119 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gm45113-201ENSMUST00000207518 165 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr1Q8VHP6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms