Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm23949-201ENSMUST00000104027 127 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm12217-201ENSMUST00000118858 696 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm16505-201ENSMUST00000179981 232 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mir7677-201ENSMUST00000184226 67 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm27390-201ENSMUST00000184516 176 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm43184-201ENSMUST00000197247 542 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm18893-201ENSMUST00000198416 943 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Rps4l-202ENSMUST00000204242 789 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.83□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm5706-201ENSMUST00000181525 993 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm37466-201ENSMUST00000195692 652 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm42599-201ENSMUST00000201308 469 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ppp4r4Q8C0Y0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ppp4r4Q8C0Y0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.81□□□□□ -0.52
Ppp4r4Q8C0Y0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.81□□□□□ -0.52
Ppp4r4Q8C0Y0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ppp4r4Q8C0Y0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms