Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Gm27023-201ENSMUST00000182372 285 ntBASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Gm45930-201ENSMUST00000221330 292 ntBASIC9.58□□□□□ -0.88
Smco3Q8BQM7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco3Q8BQM7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gm24934-201ENSMUST00000103764 111 ntBASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco3Q8BQM7 Gm39404-201ENSMUST00000216350 313 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms