Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm14723-201ENSMUST00000118686 215 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm6114-201ENSMUST00000182472 968 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm44364-201ENSMUST00000198368 141 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm10312-201ENSMUST00000078515 489 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm14726-201ENSMUST00000120623 896 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm43822-201ENSMUST00000200285 476 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf38Q8BI21 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf38Q8BI21 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Gm6963-201ENSMUST00000147879 379 ntBASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf38Q8BI21 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms