Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim6Q8BGE7 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm4986-201ENSMUST00000119731 549 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm24845-201ENSMUST00000158034 109 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim6Q8BGE7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.4□□□□□ -0.42
Trim6Q8BGE7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim6Q8BGE7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim6Q8BGE7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trim6Q8BGE7 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.4□□□□□ -0.43
Trim6Q8BGE7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm19994-201ENSMUST00000217086 586 ntBASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim6Q8BGE7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms