Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm15197-201ENSMUST00000120526 478 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm24328-201ENSMUST00000175104 67 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm29808-201ENSMUST00000194419 468 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm18035-201ENSMUST00000211962 589 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm9487-201ENSMUST00000216600 472 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Map1b-203ENSMUST00000223725 2669 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm23769-201ENSMUST00000104441 121 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm14165-201ENSMUST00000121456 952 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm5395-201ENSMUST00000121650 915 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm9204-201ENSMUST00000212641 947 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm5449-201ENSMUST00000081132 357 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms