Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm17825-201ENSMUST00000206836 794 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Gm5468-202ENSMUST00000227851 682 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.86□□□□□ -0.51
Ddx6P54823 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Ddx6P54823 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ddx6P54823 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.86□□□□□ -0.51
Ddx6P54823 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx6P54823 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ddx6P54823 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Gm14219-201ENSMUST00000120414 288 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.85□□□□□ -0.51
Ddx6P54823 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm20495-201ENSMUST00000173902 235 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.85□□□□□ -0.51
Ddx6P54823 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ddx6P54823 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Ddx6P54823 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ddx6P54823 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.84□□□□□ -0.51
Ddx6P54823 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Ddx6P54823 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Ddx6P54823 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ddx6P54823 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ddx6P54823 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ddx6P54823 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms