Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmga1P17095 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmga1P17095 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmga1P17095 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmga1P17095 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmga1P17095 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmga1P17095 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.88□□□□□ -0.51
Hmga1P17095 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hmga1P17095 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hmga1P17095 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmga1P17095 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hmga1P17095 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmga1P17095 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm12795-201ENSMUST00000117594 539 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Gm15528-201ENSMUST00000117821 864 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm21778-201ENSMUST00000178779 471 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmga1P17095 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm5100-201ENSMUST00000195631 589 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Gm43163-201ENSMUST00000196571 442 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm6722-201ENSMUST00000221586 390 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm10263-201ENSMUST00000085163 300 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmga1P17095 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.87□□□□□ -0.51
Hmga1P17095 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmga1P17095 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hmga1P17095 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.86□□□□□ -0.51
Hmga1P17095 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.86□□□□□ -0.51
Hmga1P17095 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm23694-201ENSMUST00000179335 110 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Gm8492-201ENSMUST00000182375 987 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm8197-202ENSMUST00000193422 934 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Gm37028-201ENSMUST00000194276 107 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.86□□□□□ -0.51
Hmga1P17095 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmga1P17095 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmga1P17095 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hmga1P17095 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms