Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm11956-201ENSMUST00000119525 512 ntBASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm11244-201ENSMUST00000121243 237 ntBASIC11.49□□□□□ -0.57
Hoxa4P06798 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm18367-201ENSMUST00000176139 600 ntBASIC11.49□□□□□ -0.57
Hoxa4P06798 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.49□□□□□ -0.57
Hoxa4P06798 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxa4P06798 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxa4P06798 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm4294-201ENSMUST00000105169 614 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm11836-201ENSMUST00000121022 441 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm44008-201ENSMUST00000204345 412 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm8342-201ENSMUST00000209839 757 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxa4P06798 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.48□□□□□ -0.57
Hoxa4P06798 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms