Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr1O70481 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubr1O70481 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubr1O70481 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubr1O70481 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Ubr1O70481 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.86□□□□□ -0.03
Ubr1O70481 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Ubr1O70481 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gm11957-201ENSMUST00000118304 779 ntBASIC14.86□□□□□ -0.03
Ubr1O70481 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Ubr1O70481 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.86□□□□□ -0.03
Ubr1O70481 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ubr1O70481 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.86□□□□□ -0.03
Ubr1O70481 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Ubr1O70481 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.86□□□□□ -0.03
Ubr1O70481 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.86□□□□□ -0.03
Ubr1O70481 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr1O70481 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.86□□□□□ -0.03
Ubr1O70481 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.85□□□□□ -0.03
Ubr1O70481 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm14592-201ENSMUST00000117201 560 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Gm12712-201ENSMUST00000120676 801 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Gm14993-201ENSMUST00000121180 164 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm44605-201ENSMUST00000206892 949 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm5449-201ENSMUST00000081132 357 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.85□□□□□ -0.03
Ubr1O70481 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ubr1O70481 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ubr1O70481 Gm18733-202ENSMUST00000174447 401 ntBASIC14.85□□□□□ -0.03
Ubr1O70481 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr1O70481 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ubr1O70481 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Gm22937-201ENSMUST00000103954 131 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.84□□□□□ -0.03
Ubr1O70481 Gm22344-201ENSMUST00000122642 278 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.84□□□□□ -0.03
Ubr1O70481 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.84□□□□□ -0.03
Ubr1O70481 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Ubr1O70481 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.84□□□□□ -0.03
Ubr1O70481 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms