Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm24255-201ENSMUST00000104481 128 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm11509-201ENSMUST00000117358 325 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm25700-201ENSMUST00000177693 110 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm38341-201ENSMUST00000195357 515 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.36□□□□□ -0.59
Cdh17Q9R100 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh17Q9R100 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm9797-202ENSMUST00000218003 294 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm7940-201ENSMUST00000218195 769 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.35□□□□□ -0.59
Cdh17Q9R100 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh17Q9R100 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh17Q9R100 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms