Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm14571-201ENSMUST00000118292 570 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm8754-201ENSMUST00000118391 520 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm6238-201ENSMUST00000120999 465 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm15727-201ENSMUST00000122416 437 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm16560-201ENSMUST00000159115 404 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm5259-201ENSMUST00000191231 800 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm38349-201ENSMUST00000195732 462 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm44304-201ENSMUST00000200509 145 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Lysmd1Q9D0E3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lysmd1Q9D0E3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.4□□□□□ -0.43
Lysmd1Q9D0E3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lysmd1Q9D0E3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm14633-201ENSMUST00000121152 470 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm24992-201ENSMUST00000157412 130 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm23899-201ENSMUST00000158112 90 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm17799-201ENSMUST00000183270 667 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm44540-201ENSMUST00000205640 354 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gm8618-201ENSMUST00000097570 432 ntBASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd1Q9D0E3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm8302-201ENSMUST00000119217 852 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm12745-201ENSMUST00000121767 214 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm6881-201ENSMUST00000121811 833 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm21778-201ENSMUST00000178779 471 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Mir6396-201ENSMUST00000183603 111 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm30946-201ENSMUST00000198288 724 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm42821-201ENSMUST00000199771 489 ntBASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd1Q9D0E3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms