Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Gm43760-201ENSMUST00000202120 3015 ntBASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Acot6-202ENSMUST00000222921 3622 ntBASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61bQ9CQS8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm37995-201ENSMUST00000194958 1714 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm44153-201ENSMUST00000204162 1580 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm24231-201ENSMUST00000104315 133 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm23912-201ENSMUST00000104687 87 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Nr2e1-202ENSMUST00000105498 780 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm14466-201ENSMUST00000119028 451 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm15131-201ENSMUST00000119124 595 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm13408-201ENSMUST00000119822 798 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm13935-201ENSMUST00000121859 798 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm23085-201ENSMUST00000157849 293 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Mir1943-201ENSMUST00000158276 73 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm24514-201ENSMUST00000174961 285 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm9211-201ENSMUST00000182882 975 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm5066-201ENSMUST00000188479 822 ntBASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC6.54□□□□□ -1.36
Sec61bQ9CQS8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms