Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Morn2-202ENSMUST00000227729 656 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ska1Q9CPV1 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm15610-201ENSMUST00000120584 195 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm13786-201ENSMUST00000122371 333 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm29396-201ENSMUST00000185659 716 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm38241-201ENSMUST00000192641 898 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm38158-201ENSMUST00000194617 339 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska1Q9CPV1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm4986-201ENSMUST00000119731 549 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm14441-201ENSMUST00000121960 540 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm8062-201ENSMUST00000139696 444 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm17420-201ENSMUST00000164753 153 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm26956-201ENSMUST00000182176 986 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 154.7 ms