Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gm18367-201ENSMUST00000176139 600 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gm43520-201ENSMUST00000197996 164 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b1Q99NB9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm25076-201ENSMUST00000104098 132 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm9136-201ENSMUST00000193368 454 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b1Q99NB9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.4□□□□□ -0.43
Sf3b1Q99NB9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b1Q99NB9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b1Q99NB9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms