Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm21811-201ENSMUST00000096485 930 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm26047-201ENSMUST00000157308 113 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm23085-201ENSMUST00000157849 293 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm5733-201ENSMUST00000190232 939 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm26047-202ENSMUST00000198840 115 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm43966-201ENSMUST00000203301 612 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb6Q91XZ4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm14028-201ENSMUST00000117434 479 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm12501-201ENSMUST00000119163 529 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm13263-201ENSMUST00000121271 838 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms