Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm42693-201ENSMUST00000196779 631 ntBASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm18584-201ENSMUST00000203098 964 ntBASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm5904-201ENSMUST00000210286 865 ntBASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm5781-201ENSMUST00000219792 443 ntBASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm11Q8BUV6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm27839-201ENSMUST00000184242 106 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 AC096628.1-201ENSMUST00000226060 641 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 AC115784.1-201ENSMUST00000227687 1010 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm11Q8BUV6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Lsm11Q8BUV6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm11Q8BUV6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms