Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm18367-201ENSMUST00000176139 600 ntBASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Mir6546-201ENSMUST00000184460 62 ntBASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup54Q8BTS4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm14071-201ENSMUST00000117817 509 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm4726-201ENSMUST00000135604 736 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm6019-201ENSMUST00000148369 736 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm8959-201ENSMUST00000213150 571 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup54Q8BTS4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm15573-201ENSMUST00000119487 540 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm17831-201ENSMUST00000205579 900 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nup54Q8BTS4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms