Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm11509-201ENSMUST00000117358 325 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm12217-201ENSMUST00000118858 696 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm12196-201ENSMUST00000120954 262 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm25881-201ENSMUST00000157783 103 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm16570-201ENSMUST00000161951 436 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm27552-201ENSMUST00000183351 62 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm27844-201ENSMUST00000183613 62 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Mir6927-201ENSMUST00000184494 71 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm9797-202ENSMUST00000218003 294 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sfr1Q8BP27 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm37466-201ENSMUST00000195692 652 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 AU022133-201ENSMUST00000200601 873 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Rps4l-202ENSMUST00000204242 789 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms