Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm14058-201ENSMUST00000116082 735 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm12579-201ENSMUST00000118040 783 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm4909-201ENSMUST00000118749 794 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm12217-201ENSMUST00000118858 696 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm11941-201ENSMUST00000119904 610 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm5369-201ENSMUST00000217499 588 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rpp38Q80UU2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm20495-201ENSMUST00000173902 235 ntBASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm5363-201ENSMUST00000211927 938 ntBASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpp38Q80UU2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm15595-201ENSMUST00000120840 961 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm9540-201ENSMUST00000188230 478 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm29499-201ENSMUST00000189151 486 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm28329-201ENSMUST00000191208 689 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm29171-201ENSMUST00000191397 486 ntBASIC11.66□□□□□ -0.54
Rpp38Q80UU2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms