Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Gm5781-201ENSMUST00000219792 443 ntBASIC12.44□□□□□ -0.42
CtifQ6PEE2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CtifQ6PEE2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm8598-201ENSMUST00000221184 836 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.43□□□□□ -0.42
CtifQ6PEE2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CtifQ6PEE2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm9192-201ENSMUST00000183221 985 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm39404-201ENSMUST00000216350 313 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.42□□□□□ -0.42
CtifQ6PEE2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CtifQ6PEE2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms