Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm25872-201ENSMUST00000177784 100 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm5178-201ENSMUST00000219380 898 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Gm26782-203ENSMUST00000227103 751 ntBASIC13.52□□□□□ -0.24
Scn9aQ62205 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.52□□□□□ -0.24
Scn9aQ62205 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn9aQ62205 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm14113-201ENSMUST00000121399 976 ntBASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn9aQ62205 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm43966-201ENSMUST00000203301 612 ntBASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scn9aQ62205 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm10254-201ENSMUST00000052888 867 ntBASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm25580-201ENSMUST00000083409 327 ntBASIC13.52□□□□□ -0.25
Scn9aQ62205 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.52□□□□□ -0.25
Scn9aQ62205 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn9aQ62205 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm23604-201ENSMUST00000104311 132 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm15617-201ENSMUST00000118973 771 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 Gm18733-202ENSMUST00000174447 401 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 AC174797.2-201ENSMUST00000225835 165 ntBASIC13.51□□□□□ -0.25
Scn9aQ62205 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn9aQ62205 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn9aQ62205 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn9aQ62205 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scn9aQ62205 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms