Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Usp30Q3UN04 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm26013-201ENSMUST00000104404 119 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm15615-201ENSMUST00000118876 198 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm11244-201ENSMUST00000121243 237 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm28324-201ENSMUST00000187913 264 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm37905-201ENSMUST00000195310 341 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm44315-201ENSMUST00000203041 219 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Gm4978-201ENSMUST00000071565 801 ntBASIC11.78□□□□□ -0.52
Usp30Q3UN04 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp30Q3UN04 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp30Q3UN04 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Gm25072-201ENSMUST00000175233 235 ntBASIC11.77□□□□□ -0.53
Usp30Q3UN04 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Gm37319-201ENSMUST00000193500 636 ntBASIC11.77□□□□□ -0.53
Usp30Q3UN04 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.77□□□□□ -0.53
Usp30Q3UN04 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.77□□□□□ -0.53
Usp30Q3UN04 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp30Q3UN04 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp30Q3UN04 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms