Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smad1P70340 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smad1P70340 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.06□□□□□ -0.48
Smad1P70340 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm12164-201ENSMUST00000121695 551 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm23699-201ENSMUST00000158835 135 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.06□□□□□ -0.48
Smad1P70340 Gzmn-202ENSMUST00000225535 989 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Smad1P70340 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.06□□□□□ -0.48
Smad1P70340 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.06□□□□□ -0.48
Smad1P70340 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smad1P70340 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.05□□□□□ -0.48
Smad1P70340 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gm23912-201ENSMUST00000104687 87 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Gm13408-201ENSMUST00000119822 798 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Gm13935-201ENSMUST00000121859 798 ntBASIC12.05□□□□□ -0.48
Smad1P70340 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.05□□□□□ -0.48
Smad1P70340 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Gm5070-201ENSMUST00000177599 862 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.05□□□□□ -0.48
Smad1P70340 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.05□□□□□ -0.48
Smad1P70340 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Smad1P70340 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms