Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ctdsp1P58466 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.09□□□□□ -0.95
Ctdsp1P58466 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm4875-201ENSMUST00000118257 786 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm11964-201ENSMUST00000120982 444 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm17208-201ENSMUST00000168388 535 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm44335-201ENSMUST00000196879 141 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm44346-201ENSMUST00000198851 141 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm7774-201ENSMUST00000200064 533 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.08□□□□□ -0.96
Ctdsp1P58466 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ctdsp1P58466 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm44397-201ENSMUST00000195950 113 ntBASIC9.07□□□□□ -0.96
Ctdsp1P58466 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ctdsp1P58466 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms