Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CopeO89079 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CopeO89079 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopeO89079 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopeO89079 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopeO89079 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopeO89079 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.02□□□□□ -0.49
CopeO89079 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.02□□□□□ -0.49
CopeO89079 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Gm13297-201ENSMUST00000120205 934 ntBASIC12.02□□□□□ -0.49
CopeO89079 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CopeO89079 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.02□□□□□ -0.49
CopeO89079 Gm26956-201ENSMUST00000182176 986 ntBASIC12.02□□□□□ -0.49
CopeO89079 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Gm8956-201ENSMUST00000203939 825 ntBASIC12.02□□□□□ -0.49
CopeO89079 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.02□□□□□ -0.49
CopeO89079 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.02□□□□□ -0.49
CopeO89079 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.02□□□□□ -0.49
CopeO89079 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.02□□□□□ -0.49
CopeO89079 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopeO89079 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CopeO89079 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CopeO89079 Gm15824-201ENSMUST00000119516 955 ntBASIC12.01□□□□□ -0.49
CopeO89079 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.01□□□□□ -0.49
CopeO89079 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.01□□□□□ -0.49
CopeO89079 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CopeO89079 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.01□□□□□ -0.49
CopeO89079 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopeO89079 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.01□□□□□ -0.49
CopeO89079 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CopeO89079 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12□□□□□ -0.49
CopeO89079 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms