Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm23596-201ENSMUST00000104304 132 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfwd3Q8CIK8 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm3332-201ENSMUST00000189337 928 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm9136-201ENSMUST00000193368 454 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfwd3Q8CIK8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms