Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm11700-201ENSMUST00000119409 403 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm12138-201ENSMUST00000122180 951 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm43818-201ENSMUST00000200605 466 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.58□□□□□ -0.55
Ccdc28bQ8CEG5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Ccdc28bQ8CEG5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccdc28bQ8CEG5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm29127-201ENSMUST00000188304 517 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.58□□□□□ -0.56
Ccdc28bQ8CEG5 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms