Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm8459-201ENSMUST00000162504 760 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm37852-201ENSMUST00000193027 350 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm11619-201ENSMUST00000117474 237 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm6630-201ENSMUST00000119199 454 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm12274-201ENSMUST00000120062 385 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm5870-201ENSMUST00000196461 282 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm43969-201ENSMUST00000204833 535 ntBASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a6Q8C6K9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm29763-201ENSMUST00000205306 616 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm5599-201ENSMUST00000209602 788 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms